YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC14C4.11
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSDSIEAG IYEPWRDKYM NYPELKHLLK TEEEAPSWGE NDESKFVSVM DAQLEKVYAF  60
   61 HLEILKELNE SVDWVKSKVS ASQEPDGPPI SKEEAIKLLE RLDSCTETVK KLEKYTRLNL 120
  121 TGFFKIVKKH DKLYPGYSLR PVFQVRLRAC PLGSVQFNPL LAEIFSLYNT LRDGLSAPSN 180
  181 SVQVKPKHEH NVDYNSSMYR RRTFRFWVHP DNVMEVKTYI MRHLPVLYYS GKQGFDKDQN 240
  241 GVSGILDPIS TCLYLDNSNF DLYSQNLERS EQAYSLRLHW YGKLTPKTDI IVERMVRQGS 300
  301 TLSHSEDRFT IREKKVRELL SGRYDFRKVE DDHSTTASDQ KKKLIEDVEQ LIVDNHLQPV 360
  361 LRSVYTRTAF QIPGDDEVRI NLDSDWVMIR EDSLDIERPC RDPEDWHRHD IDDADFPYKH 420
  421 LRKGEYSRFP YSVLEIRECV RYDEDEPLWI SELRNSHLIS EIDGFSKYEH GVAILFEKYV 480
  481 SLLPMWVFSM DQDIRKDLQE VYSHPEGSAG SRNVYIKRRN QRVLKQNMTP EPSQPSPLVN 540
  541 RLKANEMHPV SEEPEDNREV YRNEHGDHFN FRSIPGLLKP STYGSFKHHG KTFVTPPHIK 600
  601 KPEIPLRVSG PIKVEAKVWL ANERTFLKWL HVVVLLGSLA LALYNSAGER LGQAFGVVYT 660
  661 LLAIFIGFYA WKLHAKRSQM IKSRSPAPMT DYWGPLIVGT ALAISLIVNM SFALKDAVYQ 720
  721 NLIEPDRLLV KLFT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle