YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC14C4.10c
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELELDLLTG LQLLSEYCPR VTPNAPPRRA SVAVIIAFKE SQDFSNPKWP QCIPITSVPY  60
   61 VLLIQRSFRD TDRWSGHMAL PGGTRSLTDK SDIQTAHRET LEEVGIDLRK EHAHFVGALD 120
  121 ERVITSNWGQ FPLLLLSSFV FILPYMPSLR LQESEVFSAQ WYPLADLLLP ECQTRIQIDS 180
  181 SRALKKTYPR FIKTLFHLAV GNLMYSAIRL EFDPSSATYS LPPYQRPFLR GITHSIFVDL 240
  241 FIFLSPSSAR HCLCWSLPYF QHYDLRFIAS FFTQFYRLRL HQVYPRGNWV FTCLNGYYPY 300
  301 LKLTLLVGFL FRLFLVYLLF LIISAYYKS

Type	Start	End	Confidence
Cytoplasmic	1	230	0.56
Transmembrane Helix	231	253	0.60
Non-Cytoplasmic	254	303	0.52
Transmembrane Helix	304	327	0.84
Cytoplasmic	328	329	0.70