YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALG14_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTYVLTAIA VLASLIILLV GRNAIKSSKK KPFQKHLLVF FGSGGHTGEM LNLLNALDDK  60
   61 LYSVRSYVAG SDDTMSVSKA SLLSNSLPSV KSKIFKVPRA RYVKQSWLTT PFTAFWSLLG 120
  121 SISVIFWNPF GIPDVILCNG PGTCVFICLL GYLAKFLGKN VKIVYVESFA RVKSLSLSGK 180
  181 ILMPFVDRFL VQWPDLATKY KRAEYIGIVA

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.84
Transmembrane Helix	6	25	0.93
Cytoplasmic	26	106	0.96
Transmembrane Helix	107	127	0.92
Non-Cytoplasmic	128	134	0.75
Transmembrane Helix	135	154	0.92
Cytoplasmic	155	210	0.92