YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PUN1_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMGFNPIKA LFTGIGTVCV GVGALLSILC IINQTQHNIA FQNIYFIQLN TTSIFSVANQ  60
   61 TAVVNNTSNL LNELTGTLVD TLETYIDQGA TDLIEQVEQE MKDVSELPDW YSIGLWNYCQ 120
  121 GNSSDYTNPT YCSTPSPSYY FNPLTMLETS INNATGSQIN ITLPSEVDLG LKVLKGACYA 180
  181 MRAMYILGFI FFALTIVSIV ISCLPFFGPL FLNVFSFFAT IFTFIAAVIA VATYRIAISE 240
  241 LEKNIEILNI PIVLGKKIYA YSFLSAAAGL AACILYFIGN LTSGYSPL

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.71
Transmembrane Helix	10	32	0.92
Cytoplasmic	33	184	0.94
Transmembrane Helix	185	208	0.90
Non-Cytoplasmic	209	214	0.83
Transmembrane Helix	215	238	0.92
Cytoplasmic	239	257	0.98
Transmembrane Helix	258	279	0.96
Non-Cytoplasmic	280	288	0.92