YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL8_SCHPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKLFQNKL LLAGIGGFMV GGLASWVVSS DAYTAYHRLP ASAKHISEIS KSPEAVQMID  60
   61 NIYRERQRSM KMEEHPSLLQ SKYPSNFLSF KDGLIPVFKT FYDPEHEEWI SIGLMGKALT 120
  121 GYQKLAHGGA IATLLIESLE TVRNLRSSQA NSQSTQPRDP IPTENFDVRT PSYSINYKKP 180
  181 VPAGDWVIVR VKDDVARLYN SKSQLLAEAL DLQS

Type	Start	End	Confidence
Signal Peptide	1	30	0.88
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	214	0.99