YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tim40
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAKNLLFRF PKCIRINGYN NMRRSLLQRN GFQAGICRKF GTATKTDVWK GRFLPIVSGV  60
   61 AAASLTAGYL LGKNTSNASS SQDNDHPVVG EHVHTETQSY NEPYMQRHRI EDAIEKKMTS 120
  121 ETQPSTDEKG RKVSATENSA PKKTDKEKSS GETAGNILRE QIATGKDDDE YARKFEEVEE 180
  181 ESSEESAFNP DTGEINWDCP CLGGMAHGPC GEEFKAAFSC FVYSKSEPKG MECLDKFQAM 240
  241 QACFQKHPEI YQDMVGESEE EDAETNEKPS TTSDENNQPQ SPPSDNASNP EEDVMNMEKE 300
  301 IVNLTPMSVI KEI

Type	Start	End	Confidence
Cytoplasmic	1	52	0.69
Transmembrane Helix	53	72	0.70
Non-Cytoplasmic	73	313	0.99