YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC1F8.02c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLKIYFVL IFLFLKGINS AYVSNEEGET VDFTFSGFYA NLTYPNEISE LNYVEGNYLS  60
   61 TRIVRFNGSF YCDTTILSET NNVTGSCYVA NCANDTVLEI CDSGKEVHFT DMSGTTWSAD 120
  121 TFTENLYWFC GGDGNKPNMT TAAAMNSDID SYYVYGNWTI DTADSTVADY TCNYTHFQEA 180
  181 GDIEKGDVYT ASADSSDSSS ASSTIFKPSY FISCLLSVGL YLVLNF

Type	Start	End	Confidence
Signal Peptide	1	20	0.92
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	226	0.93