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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC26F1.08c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFHHGWTFH KLRKNEHFLK YSAIFYSLLK PVVALFACQC LVLIRPLARK IGSFPFLILT  60
   61 FHTLFYPIQN TVGAQFEVIG QSLMGTAVGV TWGIITKLFA TAANRNHGDG SPILATSLAL 120
  121 ASFISAYIRS RYGYRFFCII WIFIDCFLLT RDPFEKTIAK SFYISLVYPS LIAAGVVSLV 180
  181 TILVPPMRMA SDLVGQSGLD HLNKIMQSLN FSVENFFPSD ESVSFSSSSS VIKRMFKEHE 240
  241 SVLRNSMDDF HTAISSSEIE LNYSNVSVST LKLLEPKFER ITLAMSAQLA ASFTLYETYN 300
  301 FSIYKNQDKE VEGDIRVSEL RFSLPESTEV QQKRNIFTPQ YQLHINGSLR AKVRPKDSKD 360
  361 RIVNLSNLYF SNVDHMSSLI LGSLKLAHAI MKWLVSDVEH IPDERLRECI ESLQEIDSKE 420
  421 ENLMTEIFCT AFKETKKVND FGGFEEIEDE EEVLVIAYYL FNLFEVAREV KNLLLLLEGL 480
  481 KAQRHNKPKL FFRKFNLSLF DKQKYANYAI SALLTHFTAG DADKCDDEAP DDASGEEDDS 540
  541 PKVLNDQSFF DSVRYPLKFF LRKMRRKCWR VYHFTARSKD VRYGLKMAIG IGLLSIVAFQ 600
  601 KSTAARYTLW NGQWSLISTL FVLEVTVSTT LRVGLFRTLG TLSGAVYAYA AWEVSQGWSY 660
  661 AIATLTFAIS WVSCYVKYNT EYSGIATVFN ITFPPILYGS YLKTSTISPF HLACIRFIVV 720
  721 NVGIGMAIVV NIVVFPYLAR RVLKYKLGQA SLLSLKQYTT LSDYLLSRNL YTNLTICEGY 780
  781 KKQISSLLVT ARKLLQLVNM EFNLKGPFPV GIYNDLIIKL ENLGIRLVVL NRVRSRFGLY 840
  841 LYYDVVKNMI DYRKDLIVSM TLTFYILYNS IMSKAPIPYF VPSCRQALWN LRLAIEEEGK 900
  901 RRFVTNGGIL AQGAGSDGVA KDVPENHSWL PAQKNFFLYY VECQVIGDIV TDLEYSISLV 960
  961 RRINGEKENE TIGKKMA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle