YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	rsc58
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAESCSLIL SYISSAPAGN LVLNCTATTN KQTLEANLKS AVYQRYPEFL EDWTNVCVHI  60
   61 IHSYFPKDAD YWNVDKLYTS VNRITTLEQS KVVGKEIKNG FTFDAENSTA SLENDLQPQF 120
  121 RSHALFMVGS AGPLFSSTAR TSRLDSRLPD GGIIAKPVAL LPTPSVANSQ EYTLDKLSPP 180
  181 STAKPPASVI EFNPSLAKLP TVKYLQSGPF SSIAPYKNSS SSVIPDSSFH SVACYRASSH 240
  241 YKEAPVEKSI DIDIIQNNLS LLEEDSWTSV PIQGELVELN KLLQHLQLLQ NQRITSHNVL 300
  301 SDEERQISVQ VQNLILKLAK DYDMSPEDFL MDDFTLSLTQ YGAFYRGTLP LSAQPLELPS 360
  361 QQLLRSQSNA ALRSNSLSMN GSLSPSSTNV PLQSYRRTTK SRR

Type	Start	End	Confidence
Signal Peptide	1	18	0.62
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	403	0.98