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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC6C3.06c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRLNRIQS KMKLWIKDKN LSNPSIPLKV LNKSFRSSRQ SSVSNGHGLY SLDRDETESL  60
   61 MSSHEASNAG ISLDSSFRVI QVGQPEPQYG NNAVTNTKYD LFTFLPKCLY EQFRYFYNMY 120
  121 FLLVSLSQLI PPLKIGYLST YIAPLIFVLL ITLTKEAVDD LKRRRRDSYA NNEIYTVNDS 180
  181 PCAAQNIQAG DVVYIAKDQR IPADMILLET TVGNEAFIRT DQLDGETDWK LRIPCSNQHT 240
  241 EGIVHADAPI KSVHHFYGTF TLNNQKRPIS VDHTLWANTV LASDGVYGVV VYTGKDTRQS 300
  301 MNSSKAKTKV GLLEKEINFY SKILCTFVLV LSIGLTFSHG IKTDWYISVF RYLILFSSII 360
  361 PINLRVNLDL AKIVHSKNTE SDPNLPGVVV RSSNIPEELG RIEYVLTDKT GTLTQNEMEM 420
  421 KKLHVGTMGF SAESMDVVQA CIQNYSTPIP LSEDSKTLVR NLVLALSLCH NVTPSKGHDG 480
  481 VVSYQAASPD EVAIVKWTST LGLVLTNRTR DAITLNNNVY KILNIFPFKS ETKRMGIIVQ 540
  541 SPDEKITFYL KGADSIMQNF VKPSFWLEEE CGNLAREGLR TLVVAKKDLS AEEYSAFSLA 600
  601 HSDASLSFSN SRDKKMEEIV SRYLENDMDL LGLTGVEDKL QKDVKITLEL LRNAGIHVWM 660
  661 LTGDKVETAR CIAISSRLVS RGQYIHTINQ LSSREEAHNH LLTLRNKPDS CLIIDGESME 720
  721 FCIGYLQNEF IDIVSDLSSV VICRCTPTQK ANMTRLIQEK KQASVCCIGD GGNDVGMIQV 780
  781 ANVGIGIVGK EGQQASLAAD YSVKEFSHVS RLLLWHGRIS YKQTSKLAMF VIHRGLLISV 840
  841 CQVVYSVISA FEPIALFQGL LLVGYSTMYT MLPVFSIVYD RDVSEKLVFL FPELYKEMRE 900
  901 QKCFSYKNFI SCVLISVYQG LIIQLFTFYL IGFEEEGKML AVCFSCLIFN ELIMVALQIN 960
  961 TWEQTIVMSE LLTLMMYILS VPFLTNYFEL KFLLGLKFYW VSALILFISL LPVWCGKALK1020
 1021 RKLKPSSYAK LQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle