YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC4G9.14
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIAKSIVIG LLICVLFFFF FVSRFNDKYE LQPLLTLGLL NASLTALSDL LAQALDSYKL  60
   61 LKFRNKRDVS LEKYGNTILL PASTSKLDVH RTIRYAAYGL CLTPIQFRWF VALSNVIQTE 120
  121 NPFIAIVLRV ALDQFIFAPL GIVFFFLFMG ITECKSYERL KSYFRKHYWP TLKANYILWP 180
  181 AVQLFNFTFV PLVLQVIFAN AVSMVWTAYL SLKNSSPNAD V

Type	Start	End	Confidence
Cytoplasmic	1	6	0.75
Transmembrane Helix	7	25	0.93
Non-Cytoplasmic	26	33	0.69
Transmembrane Helix	34	55	0.75
Cytoplasmic	56	94	0.84
Transmembrane Helix	95	112	0.75
Non-Cytoplasmic	113	134	0.70
Transmembrane Helix	135	154	0.90
Cytoplasmic	155	175	0.82
Transmembrane Helix	176	199	0.79
Non-Cytoplasmic	200	221	0.68