YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC11C11.05
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTMLMLVL LVCSYIHYVC AQIRFVTPAT TDSMDFTAIS FSWEESNTGI PLEDITNTVF  60
   61 YICSGSMDAP QPCAVLYTSP SPSSISQAGP FAISQVFGPA GRLYFLWAQS TYAGGIVNDY 120
  121 TDFFTVNGLT GTFDNYEIYA SLMALGVYPY VPTLTGFSTF LGVWPTGTMR DWYLSQTTGV 180
  181 LRTGPIQNRP DSTFTAATTD IQPLWETSSY SVFTTFAGPP IATSTVFASP TYMYTLYANY 240
  241 ASTASKPTII ATPTAGLRRR DSWAQAAPKR GMRLGEHKRG LLYS

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	284	0.95