YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YBL7_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLWRNLKS VRLPFRRAPT LPLYNVPVRR SISSSSSIPP SSSPPPRLTI TQRVKELTKK  60
   61 YGWWSLGVYI GISVLDFSAS FVLVRTLGAE RIGYLEHSIL NSIRRYFNWE IPESTASGEP 120
  121 EAYHSSIWTE LAFAYGIHKA LVVARVPLTA AIVPPLAKRF RGPRIRP

Type	Start	End	Confidence
Cytoplasmic	1	61	0.93
Transmembrane Helix	62	84	0.86
Non-Cytoplasmic	85	134	0.94
Transmembrane Helix	135	157	0.75
Cytoplasmic	158	167	0.83