YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC31F10.02
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAINSSGTKV LSFVRSVWQD FVNTNGFDAH VVSDIQIISA VPGFVECSLK LQKHHLNRMG  60
   61 NLHGGCIAAL TDLGGSLALA SRGLFISGVS IDMNQTFLQS GGTLGSSILL HAKCDRLGSN 120
  121 IAFTSVDFLT SSNEVFAKGR HTKFVRNALG DPRNCLDLAE D

Type	Start	End	Confidence
Cytoplasmic	1	59	0.56
Transmembrane Helix	60	80	0.55
Non-Cytoplasmic	81	161	0.76