YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	pis1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKFLKLSN DFPFCSGQAM SGVLDTFILT LCLGFTRVFL VLISLYFMSW HPNYCTIVYL  60
   61 YSSLLDAFDG WAARKLHQAT NFGAILDMVT DRCATSCLLC FLCAAYPKYA IIFQLLVSLD 120
  121 LASHYMHMYS TLHQGASSHK TVTKKHNWML RLYYGNNKVL FIFCAANEMF FVALYLLSFT 180
  181 PRTPPKLGYL PVPSFIYSTG ELPLSYPTLL AVLCGPICLA KQIINVVQLV NAANALVKMD 240
  241 VEQRRAAKKL Q

Type	Start	End	Confidence
Cytoplasmic	1	20	0.76
Transmembrane Helix	21	43	0.85
Non-Cytoplasmic	44	54	0.52
Transmembrane Helix	55	72	0.53
Cytoplasmic	73	158	0.49
Transmembrane Helix	159	179	0.91
Non-Cytoplasmic	180	201	0.55
Transmembrane Helix	202	220	0.46
Cytoplasmic	221	251	0.71