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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC18G6.10
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNWEDPNFE LRNLRVIDLK KILHESGVSF PVNARKIEYI RMVDRIRKNK LSSGPQHLLS  60
   61 HLQKEENSNT SKASSSEDEI APKYLYPSSP SKSTKKPHNE TEPLLSPQFI DKPSNIETPV 120
  121 KIESPHVSQN NTFQSYSELS PNVETSLTMK TPPAHASTPK FRSHKSHRVA VPMSFMDSSA 180
  181 LHTSPAFSER LKLLSSSNNF SPQLRSPKIS HRLQTSATSS PLQHKRPFTN VPERVSRDIE 240
  241 FAPLDSARPS ESSSPYSEVD SAEEDDELFQ NYVLQQTRKE SKLWSFIKKV FHDIKYANYR 300
  301 LLHNLRAFPG ISAISSSYLV HIFMILLGVV AAIFLALLRE KMFTAGFCDS GASGSSASIL 360
  361 GISFPSLCRT CPPNAICPSP NYVECKPGYV LYEPWYSSLG FWPSKYCVSD TSREESVNIF 420
  421 REECLSVLRS WNAILHCSNN SSDLLERNMS YNAHPYVADN LNISSDHISF PSKPFALGLL 480
  481 HDTLLERKSP TLGLEMFEDL FKASLAVLSE TNEVVMDSKL ICYDSWAGIP LRCRLKQQLI 540
  541 KFVWRNKVFL FGILALSGVI FKLINFFRTR SIVAKYLPSA SRFCVESLKR QKANYQMSRS 600
  601 QEPVIPLIEM HDILFHGNGP LEQIHMTKAT ARTLWEAIVE RVEQVGSVRT RESEVDGEWT 660
  661 RVWEWVGTNT LDFQTDRSFI NTTSPLRE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle