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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FIO1_SCHPO
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.60
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFFSFPIL GLLLTCVRFV VAKERLFEWN VTDVYDVDPD GSGNSRWVIG VNNKWPIDPL  60
   61 VVDYGDQVII KMTNSLANNR TTSLHSHGLF QKFTPYMDGV PQSTQCEIPP GATFYYNYTA 120
  121 LQNGTYWVHS HDMSQYPDGL RTPFIINALE EPYDYDEEYI ISMTDWYYTP FNILVPDEFK 180
  181 TWKNPTGAEP VPDTGLFNDT ANATFAMEPG KTYRLRFINI GAFNNYDVMI EDHNMTIIEV 240
  241 DGEYTEPQEV SSIHLTVAQR YSVLVTAKNS TDRNYAITAY MDESLFDTIP DNYNPNVTAW 300
  301 LSYNSDASYD LGPDIDEIDS YDDAELNPLY SWDVTESNHS INIWFDFFTL GDGANYAEIN 360
  361 DSSYVFPKVP SIMIANSTNV DGYNLEPVTY GPYTNAYIFE YGDVVDVIID NHDTGKHPFH 420
  421 LHGHTFQVLE RGEENAGLYS DQESHTYYDN PMRRDTVEIE PGSFIVIRFI ADNPGAWVIH 480
  481 CHIEWHMESG LLATFIEAPE MIPSISSPDF VKEQCMLDGV PTIGNGAGNY KNISDLSGAP 540
  541 SPPGEMPAGW TSKAIGTMAA CVISACIGMG SIIFYGASIH PVPTEELDEN DDLQEAALEN 600
  601 AAMFLDTDKA VEKVVEGKDE IK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle