YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC12G12.12
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPIIMLTS GVANTVLSKY QDSIAEESEP IKSMAVLQSL NIFLGEACLW FYVLYKRHSQ  60
   61 GPGYESLDHL PLKHKVFMAL PAIMDICGST LMNVGLLYTS ASIYQMTRGS LIIFVALFAT 120
  121 TLLKRTIGQL QWLSLSFVVL GVAIVGYSGS SSSIGSNPIL GITAVLIGQF FLATQFTIEE 180
  181 YILSFIQVDP SELVAYEGTY GVFFVLLGMI ISYYFIGSTT AGYHGWFDYS HVISRFNEVP 240
  241 ALYVISGVIL VSIAFFNVSG LAITKLHSAT TRSLLDIART FGIWIIAMAM GMESFHLLQF 300
  301 LGFVLLIYGI FTYHSIIKFP LAES

Type	Start	End	Confidence
Cytoplasmic	1	75	0.59
Transmembrane Helix	76	97	0.82
Non-Cytoplasmic	98	103	0.69
Transmembrane Helix	104	123	0.89
Cytoplasmic	124	129	0.84
Transmembrane Helix	130	150	0.89
Non-Cytoplasmic	151	158	0.72
Transmembrane Helix	159	178	0.92
Cytoplasmic	179	197	0.85
Transmembrane Helix	198	217	0.94
Non-Cytoplasmic	218	240	0.85
Transmembrane Helix	241	263	0.91
Cytoplasmic	264	274	0.78
Transmembrane Helix	275	292	0.79
Non-Cytoplasmic	293	296	0.54
Transmembrane Helix	297	317	0.83
Cytoplasmic	318	324	0.63