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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63054481
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLFRFDVL ETSTKDTERP NSKSSRLSST SGSSHPSSSS RLTVRSAVPE KSAFGSIEFI  60
   61 FYFSVILSIL TIACFKIHYV SSPKHPNYKN IEKYLKPGWL FGQKVDSADF QYSAFRENMP 120
  121 ILLLVIIVYN FLWRLVKLVF TKNTNDELAI KNNYRLCFSL LFALLVYGTG VIYVLTIALI 180
  181 NYLISKSLKN SIFNPLLTWT LDISVVFFKE YFAYCKFSSL HPGLGFLDQY TGILERWYVL 240
  241 FNITMLRLVS FNMDYYWSLK HNSEKLNTLI FDKDREPTTL TFRERVDYSC LDEDYNLKNF 300
  301 LTYIFYAPLY LAGPIISFNN FMSQMKYPTV STLKYRNLLY AIRFLVCVLT MEFLLHYAYV 360
  361 TAISKDGNWN QYSAVESAMI SFIVLFMTWL KLLIPWRLFR LWSLIDDIEP PENIVRCMCN 420
  421 NYSAVGFWRA WHRSFNRWLI RYIYVPLGGS NHSILNLFII FTFVALWHDI SWELFAWGWL 480
  481 IVLFILPERL CCFMSRRTGL TKHPYYRYIS GFGAALNIYF MIICNLIGFA VGIDGIKNVL 540
  541 VSFFLTLKGK KFIYFRICIT NYYRCNVRDS SIYNVLLCCT NHVSNSRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle