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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: vht1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEWPETSR ASSVEENPKL NIPEIVESVS DSKPSLKNQF STTVIDSSDL NVFNDGAETT  60
   61 VKEQEFTSSE LRRLQKLRLK MDLRIIPCLW ILYFLSCCLR FTVSLSFTMN TAQGHSLIQT 120
  121 LSGYSAHYLA LGLALFYVGY IIFEVPSNLM MAFIEPRIWV SRIQLTIGVV GACHAVLGTK 180
  181 HGNAQSYVAL RFFLGVAESG LWPGLAYYMS RWYRGKHLGK RIGWYYTAAQ IAAAAVSLVS 240
  241 AGFQKMDGAR GLYGYQWMFL IWGVVAIAQA LSIPWWLPAV ASKEHRKSLS SFIPLPKWMK 300
  301 TLSPQRIGFL TPADKSLHSR YIAEMNVGKR WQWSDLLKSC LDLRVWPFIL MYFGIVGVGN 360
  361 GIFNYCTLII EEINPSFSGI DISLLNAPIW LADALGIVTV MPLYDRFHKK FSFFTGSCLI 420
  421 IIAGLAVANY APRAWSRYGG LLMIGFGLGP TVPICMAWCS ASMAKTYGDV GVASSLALVT 480
  481 GLGNLGSVVT TYALYSGWPG DPTFRKSNDV CIALIGVSII ACGIEFLLDK TGFGQFNASF 540
  541 NNHDHEVEDE QEMTDIKPAL PSSQQADA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle