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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPACUNK4.16c
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRILIAHLF LPSSVGFSFD TVPHDEVGSK FMQKEESKDW IADTPLDESA IVSEEESDDD  60
   61 SLLSDLPEEI DSTNAQSNIA TPSPGTVAAA ISGIQPPPKT PSSDSPSLEN SLSNLNDLFK 120
  121 SRGRHMAFSK NDGTNLSLPP SRHQSPPPSS VLASQRHHRR HDSELEEFAR RASRSLSFSM 180
  181 NGTPQRRMTF DAEAWKNVIF KIKPSSFGNA SFYNAISAAT RSKQFDDHLF VGTCGIPTDS 240
  241 LPDSLKERIS HDYITEHSSL VVYPTDTDFV GHYNHYCKNI LWPTFHYQIP DNPKSKAYED 300
  301 HSWANYVKVN KAFADTIVDN YEQDDMIWIN DYHLLLVPEM VRERLPRAKI GFFLHIPFPS 360
  361 SEVFRCLATR QEILKGMLGA NILGFQIPEF AYHFLQTCSR LVNIDIRKNG VVSFENRQID 420
  421 VIALPISIDP GFIDRCLASP PVEHWAKVLQ DRFRGKHIIL SHDKLDPIRG LRSKLISFER 480
  481 FLQKYPEYRE NTILLQVAPE SLQDSEHLPH ISDIVTRINS AYSNIASRHV PVILLRQKLG 540
  541 YAQFLALMMI SDALIDNSLR EGISLTSHQF IYVQRKRHRP LILSEFVGSA SILNDNAIIV 600
  601 NPWDYSKTAE AFRTALTMSE EECQKRNKAM CNLILRHDAA SWAVTFQSLI KESWKEQIDM 660
  661 QRIPAFTAQL IKEPYQNAQK RLILLYFEGT ISTWGSQYHN VMTSLQRTIN LLNMLTSDPK 720
  721 NTVYVFSALS CQELEQLFQR VPKLGIVAEN GCFVRSPPKG DATMPVSKKE IAELWKNKVL 780
  781 GTDLTWMKTV SEIFEYYAER TTGAYVENKD ATVILHLREA EDDEAAMWAA KECCESVNNF 840
  841 NVPCSATIQN DMVVCRSNKV SKRLAAEDIY SANGGDYDFI FAASNDPDDD TVFSWMKNFK 900
  901 QSKKEVVPFT FSVCVSEHGN STNADAESSG VFGFLQALEK VYSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle