YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	srp102
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGTSQAFKI IVATIIIGAI ISTLGIFFTR KTIQKKLPAV FLIGPSDSGK TSLFCELIYK  60
   61 EKKTTVPSIE PNEAVWKYGA WLVDLPGHPR AKRWITTKFS GNYNVKAVVF VLNSATIDRD 120
  121 VHEVGLMLFD TILKCRKHHV PHLLIACNKF DLFTAQPAEK IQQLLKAELH NILEEKNLQL 180
  181 ESIVSEDVDW ESVADQIEDT DLKFLPGSVA KMSNIEEWIS WMESALQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.58
Transmembrane Helix	7	29	0.91
Cytoplasmic	30	227	0.60