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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC14F5.13c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASERDPLLP VHGEGPESPS RRNWKTWIKH GILLILVLST VIFFYFFSSH KSKGTNEKPK  60
   61 FVIMMVSDGM GPGSLSMTRS FVETLNDKEG YRLPLDEHLI GSSRTRSSSS LITDSAAGAT 120
  121 AFSCANKTYN GAVGVLDNEK PCGTILEAAK EAGYLTGIVV TSRVTDATPA SFSAHAANRF 180
  181 MQDLIAEYQV GMGPLGRSVD LLFGGGLCSF LPKSTYRSCR SDNLDLLKYA RKKEGFQILL 240
  241 NRTDFDELSN AQLPLLGLFS DYHLSYDIDY QPEVQPKLSE MVETALDVLL NATNEDTSKG 300
  301 FFLLIEGSRI DMASHNNDPI AHVYEVMEYN RAFEIASAFV EKNGGSLIST SDHETGGLTV 360
  361 GRQVSKKYPE YLWKPQVLSL ALHSIEYLAS AIVNHNQNTL LPYIEQFVLP AIGIPDPNPK 420
  421 QIHDIYVARH NIFNLINVLS DIVSVEAQIG WTTHGHTAVD VNVYGVGEVT EHLRGNMENI 480
  481 EIGQFMEIYL NVSLSDVTEK LKDAPIHGAP DRPSLVETSF SDRLVGFGAD LF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle