YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	pof4
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSLKDLCIQ VAQKHVHDID DIGDCPFELV KPILEKARPE HLIDLEEKSP HLKVDTQPLW  60
   61 KDHVLRDFGL ELQKRTILNN IDDWRGLYGK LKKKRNAHYN VASAKLRSAY TKLEQSKQNK 120
  121 RIVPLEREPR AARPPKRPRP MSNYCPKSSL MARAKSDFLK KALLPVILFQ LLHPLGAFPN 180
  181 CIPLDVLLLT LLILLQSVL

Type	Start	End	Confidence
Cytoplasmic	1	168	0.50
Transmembrane Helix	169	194	0.52
Non-Cytoplasmic	195	199	0.71