YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPI12_SCHPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWFWSTLLV TAIAVLSTAN ESSSGQEKLA VESILFVFAH PDDESMFFGP TIDYLGNQHS  60
   61 TRVHVLCLSN GNADGLGSVR EKELVVAASK YQIDKTNVHV VSDPQLQDGM QAKWDPTDVA 120
  121 KHISQIIERY NIKTLITFDN KGISGHPNHI ACYEGAMKIV KATPQVQVFV LESVNIFRKY 180
  181 ISYLDTIPTL VQSQAGRNDT IIIHADRKST QRIRDAMVRG HKSQMVWFRY GWIYLSKYMS 240
  241 NNVLKRAT

Type	Start	End	Confidence
Signal Peptide	1	25	0.95
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	248	0.99