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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: plh1
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSKKSKTH KKKKEVKSPI DLPNSKKPTR ALSEQPSASE TQSVSNKSRK SKFGKRLNFI  60
   61 LGAILGICGA FFFAVGDDNA VFDPATLDKF GNMLGSSDLF DDIKGYLSYN VFKDAPFTTD 120
  121 KPSQSPSGNE VQVGLDMYNE GYRSDHPVIM VPGVISSGLE SWSFNNCSIP YFRKRLWGSW 180
  181 SMLKAMFLDK QCWLEHLMLD KKTGLDPKGI KLRAAQGFEA ADFFITGYWI WSKVIENLAA 240
  241 IGYEPNNMLS ASYDWRLSYA NLEERDKYFS KLKMFIEYSN IVHKKKVVLI SHSMGSQVTY 300
  301 YFFKWVEAEG YGNGGPTWVN DHIEAFINIS GSLIGAPKTV AALLSGEMKD TGIVITLNIL 360
  361 EKFFSRSERA MMVRTMGGVS SMLPKGGDVA PDDLNQTNFS NGAIIRYRED IDKDHDEFDI 420
  421 DDALQFLKNV TDDDFKVMLA KNYSHGLAWT EKEVLKNNEM PSKWINPLET SLPYAPDMKI 480
  481 YCVHGVGKPT ERGYYYTNNP EGQPVIDSSV NDGTKVENGI VMDDGDGTLP ILALGLVCNK 540
  541 VWQTKRFNPA NTSITNYEIK HEPAAFDLRG GPRSAEHVDI LGHSELNEII LKVSSGHGDS 600
  601 VPNRYISDIQ EIINEINLDK PRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle