YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC6F6.05
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKSGLFLP LSSVITSYNE NTNLSLKTID AFLGFLVVVG GLQFGYALLV GTYPFNSFLS  60
   61 GFISCVGQFV ITVGFRMALT QQELQSSSSK KKSPVVSPYK RAFLEFCFSS LVLHFFAVNF 120
  121 LG

Type	Start	End	Confidence
Cytoplasmic	1	30	0.93
Transmembrane Helix	31	50	0.94
Non-Cytoplasmic	51	57	0.80
Transmembrane Helix	58	80	0.92
Cytoplasmic	81	98	0.96
Transmembrane Helix	99	118	0.90
Non-Cytoplasmic	119	122	0.75