YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: krp1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPALLCGPI LAIFLQFLVS SCSPLENDDL FLVQVEPEVD PVVAAEAIGA KYVRPLLNLK  60
   61 YHHLIKLHKG SDDSVQSSIR KRGIDAGILE LERQTPRWRY KRDASESDEL LNEFSNHFGI 120
  121 SDPLFYGQWH IFNSNNPGHD LNLREVWDAG YFGENVTVAF VDDGIDFKHP DLQAAYTSLG 180
  181 SWDFNDNIAD PLPKLSDDQH GTRCAGEVAA AWNDVCGVGI APRAKVAGLR ILSAPITDAV 240
  241 ESEALNYGFQ TNHIYSCSWG PADDGRAMDA PNTATRRALM NGVLNGRNGL GSIFVFASGN 300
  301 GGHYHDNCNF DGYTNSIFSA TIGAVDAEHK IPFYSEVCAA QLVSAYSSGS HLSILTTNPE 360
  361 GTCTRSHGGT SAAAPLASAV YALALSIRPD LSWRDIQHIT VYSASPFDSP SQNAEWQKTP 420
  421 AGFQFSHHFG FGKLDASKFV EVAKDWQVVN PQTWLIAPEI NVNKSFGSVN NETITEMVSE 480
  481 FTVTKDMIEK SNFKRLEHVT VRVCIPFNRR GALEILLESP SGIRSILASE RPYDENSKGF 540
  541 LDWTFMTVQH WAEPPEGVWK LLVNDRSGGK HEGTFENWQL ALWGESENPS NTAPLPYDTL 600
  601 ELPKEMVLGI YSEPNSDLTN SSTLLSPTST SFTSYTVSAT ATPTSTSHIP IPTVLPPTQP 660
  661 VLEPSYREIV AFITFFLLFA FIFVAVIWTW ISAFWKAKAP PPLSQQEIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle