YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kms1
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNERDFDLI FDSYDFKHEG KVHLSNFLPI INDLQLLHPA SAPPLLSEFQ KQCTLEFVRQ  60
   61 NADLSITKDN FRDVYKKLTE NEDDSFANQA EKPSMEQQNS KNSIKEDANE HSVNSAHSKS 120
  121 SSNASPESLN PSQMMSKRLS LPPMSQFTDS DFVNILRTPF AQSTPLNRNT SSRNTEMPLV 180
  181 RKDKPDFSNG HHDLIKQITE LQDMLDKARD QARKKSRTVD ILEGKVNELT HQLNMADSKY 240
  241 NESKVANNSQ NNQIKTLKAQ NLNIHKNFQK IQSELIQTNS GLYSTKKELS ALQVRYATLL 300
  301 RKFTDQTKKI EELSLAASRS SENENTIRRL ALENHELKNS NNQLNNHIDD LTREKHLIAL 360
  361 SNNPKGDEFL SPSNLDEMVY SKEVGLSFTQ PSVCISIPAV GMRESEELRE LEFKCKQQKK 420
  421 TIEECKHISQ SLQSSLTAES SRNKELVAGF LMLSEEIGIQ KWIIQSLSKM SPTLNDFCRR 480
  481 YDSSMPTYEE SSHECTVLSS FSDDETGLMA TNTTMNNSSK DFMASQDTVN ADNPHFLATK 540
  541 GQPLLLLSVM KSNILRLFYV LFLFACFYGL DYILCAELLQ AFLRVVFTFC EHIIILLYGR 600
  601 YELVQPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle