YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tim17
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASADHTRDP CPYVILNDFG AAFSMGTIGG AIWHSIKGWR NSPPGEKRIS AIAAAKTRAP  60
   61 VLGGNFGVWG GLFSTFDCAV KGVRRKEDPW NAIIAGFFTG GALAVRGGWR ATRNGAIGCA 120
  121 CILAVFEGLG IALGRMNAEY NRPVAPVIPD APASGSTSAA PAAV

Type	Start	End	Confidence
Cytoplasmic	1	13	0.60
Transmembrane Helix	14	36	0.83
Non-Cytoplasmic	37	58	0.57
Transmembrane Helix	59	80	0.67
Cytoplasmic	81	89	0.62
Transmembrane Helix	90	109	0.87
Non-Cytoplasmic	110	114	0.57
Transmembrane Helix	115	134	0.90
Cytoplasmic	135	164	0.69