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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GCS1_SCHPO
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSDMLGGNK RWILFGLLSF LLNCVLVSCS VEDIEKAAND SFLWGPYRPN LYVGIRPKIP  60
   61 DSLMTGLMWS NVDDYARFSK MRHSAEHGDD IGAFGWKHYD VRRGGQQVID DFLMGIKLET 120
  121 DFVKLPEGNW ALRVHGIPLP GAPTDLTTSL FFYAYVEGEG KVGTKVNHAN HVYMEGKTPD 180
  181 LGKFRIQTFN RLGEHPVSPA SVDLESMVMD KDFFAGFNVK KEGAWRTSEL ILYLLDTKMK 240
  241 VISDKEGYES LKDLPPAYST LTLPNLPSEE GLQFIQKVFK GEFMFDIVFN YASSKKISEE 300
  301 MISQAIDKNL QEFEEKFQAT FPLKAPYDTE KAHQIFAHTA FSNLFGNVGF FTGDSIVSKN 360
  361 PIELDDEDYE FMQGFESAAG KLAEGTAFHD IERSLFTIVP SRPHFPRGFY WDEGFHLLPV 420
  421 GLWDNDFSLE ILKSWFSLVN EDGWVGREQI LGEEARSKVP DEFQTQYPDI ANPPTLILAL 480
  481 KGYIERLQEQ QGKLNNRFSG EGEDYSLDDL EYLRSVSISN PEKSVQFLRD LFPLLLRHYE 540
  541 WFRETQKGDF ETWERECFSQ VEGYRWRGRT YQHCLASGLD DYPRAQPPST AELHVDLLSW 600
  601 MTSFTRSLHF VAEFLGETEE AEKLAGYENA MLRNLEDNHW DEEVQAYCDS SVDEYDDPIN 660
  661 VCHKGYVTLL PMMLGLLPAD SGRLTSLLKL IRDENELWSP YGIRSLSMND VYFGTGENYW 720
  721 RGPIWINMNY LILSSLYQNY INTPGPNQNL ARSIYEELRT NVVNNVFENW RQTGIFWEQY 780
  781 DPTTGKGQRT KDFTGWTSLV VNIMSENY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle