YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	erg2
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTKFLTVF IPFIAGLIYY IQKYHLRSFY QFDPAKLQEL SKQSIALYAN DTKALLYDLS  60
   61 DRLVAEYGDL ITPVNQDEWV HNNAGGAMGT MFILHASFSE YLIFFGTPIG TEGHSGVHMA 120
  121 DDYFTILRGR QLAASANDLE ARVYLPGDQH VHPWGHTAQY SMPSGEPCFA LELAQGWIVS 180
  181 MLPFGFMDGL FSTIDFGTLY KTVYFTAGRM LKSVLMGKF

Type	Start	End	Confidence
Cytoplasmic	1	5	0.67
Transmembrane Helix	6	22	0.68
Non-Cytoplasmic	23	219	0.56