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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC1306.01c
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLSFRSLT SRLPRLSTLV VRGYASVANT GIEASNTSEN NLNIQEQLND NDKKRLKQIR  60
   61 NIGISAHIDS GKTTFTERVL YYTGRIKDIH EVRGKDNVGA KMDFMELERE KGITIQSAAT 120
  121 HCTWERTVDQ IEANEKQKTD FEKSYNINII DTPGHIDFTI EVERALRVLD GAVLVLCAVS 180
  181 GVQSQTITVD RQMRRYNVPR ISFVNKMDRM GADPWKVIQQ INTKLKIPAA AVQIPIGQED 240
  241 KLEGVVDLIQ MRAIYNRGSK GEKIEISQQV PENLIELAKE KRSALIEKLA DLDEEIADIY 300
  301 VMEEDPTPEQ LMGAIRRTTL ARKFTPVLMG SALSNVGVQS VLDAVCDYLP NPSEVENIAL 360
  361 NAADSEKPVS LVPSSEKPLV ALAFKLEEGR FGQLTYLRIY QGTLKRGNYI YNVNSTKKIK 420
  421 VSRLVRMHSN DMEEIEKVEA GGICALFGIE CASGDTFTDG SVSYTMTSMF VPEPVISLSL 480
  481 KPKSKDTTSF SKALNRFQRE DPTFRVQLDN ESKETIISGM GELHLEVYVE RMRREYKVDC 540
  541 ETGKPRVAFR ETLSKKVPFS YLHKKQSGGA GQYAKVEGYI EYMDGVEDES GNVVDCEFIN 600
  601 KVTGGTVPTQ YIPACEKAFY EALKKGFLIG HPIKNCRFVL EDGAYHPVDS SELAFRLATI 660
  661 SAFRTAFLQA NPMVLEPIMN VSITAPVEHQ GGVIGNLDKR KATIVDSDTD EDEFTLQAEV 720
  721 PLNSMFSYSS DIRALTKGKG EFSMEFLKYL PAPKYVQKEL VDAYNKQQQK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle