YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC29A10.16c
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKYFEPEE IVEHNNSKDM YMVINGKVYD VSNFADDHPG GLDIMLDYAG QDATKAYQDI  60
   61 GHSIAADELL EEMYIGDLKP GTEERLKELK KPRSFDNDTP PLPLLIALIV LPAIAVIVFV 120
  121 KLNK

Type	Start	End	Confidence
Non-Cytoplasmic	1	100	0.51
Transmembrane Helix	101	122	0.88
Cytoplasmic	123	124	0.42