YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ctr6
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHGGNSTMR HCSMKMTFNT DYDNLCIVFK SWHIGNLSQF LLSLLAIAIL GYLFERLRSF  60
   61 TSLKETEFQR GYAGQQSEGL LTHHSKSLKS GRPFRLCALY AVQLVFSYFL MLVAMTYNAY 120
  121 VILAIAIGAA FGYRRSHCDT VQTVGLCH

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.74
Transmembrane Helix	34	54	0.88
Cytoplasmic	55	95	0.75
Transmembrane Helix	96	130	0.72
Non-Cytoplasmic	131	148	0.42