YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19857059, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFNSILND APSSWALYFQ DGASPSYLGV THLNDYLMFY LTFIFIGVIY AICKAVIEYN  60
   61 YNSHPIAAKY TTHGSIVEFI WTLIPALILI LVALPSFKLL YLLDEVQKPS MTVKAIGRQW 120
  121 FWTYELNDFV TNENEPVSFD SYMVPEEDLE EGSLRQLEVD NRLVLPIDTR IRLILTSGDV 180
  181 IHSWAVPSLG IKCDCIPGRL NQVSLSIDRE GLFYGQCSEL CGVLHSSMPI VVQGVSLEDF 240
  241 LAWLEENS

Type	Start	End	Confidence
Cytoplasmic	1	35	0.59
Transmembrane Helix	36	57	0.91
Non-Cytoplasmic	58	78	0.55
Transmembrane Helix	79	102	0.84
Cytoplasmic	103	248	0.60