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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cit1
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNTRLASTR RLASSLLSQA SLRSRQLNPL FTSSYSTRSS SLKDRLAELI PEKQAEIKKF  60
   61 RAEHGQDVIG EVTINQMYGG ARGVRSLIWE GSVLDPNEGI RFRGYTIPEC QKLLPSSPNG 120
  121 KQPLPESLFW LLVTGEIPTL SQVQALSADW AARSQLPKFV EELIDRCPPT LHPMAQFSLA 180
  181 VTALEHDSAF AKAYERGMNK HDYWKYEYED CMDLIAKTVP IAGRIYRNLY RDGVVAPIQM 240
  241 DKDHSYNFAN VLGFANNEEF VELMRLYLTI HADHEGGNVS AHTGHLVGSA LSSPFLSMAA 300
  301 SLNGLAGPLH GLANQEVLNF LITMKKEIGD DLSEETIKSY LWKLLNSGRV VPGYGHAVLR 360
  361 KTDPRYTAQR EFALEHLPKD PMFQLVSRLY EIVPGVLTEH GKTKNPYPNV DSHSGVLLQY 420
  421 YGLKEQSFYT VLFGVSRTLG VASQLIWDRA LGLPIERPKS FSTEALKKMV ETK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle