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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: chs2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFQNPSYIN AKHRSFLQPK DTQDSQDLRN WVSHSSVDEE TAYSSSTLSS SSSKSFPCYD  60
   61 EYDEIKSPDD QKVEYMKTLR TLEEDAFSYT DSVYDFEERS FDEHEPPIPP LHKTGVFSVP 120
  121 LQPTHTVNSN SDDGYENSSK NEYLDFNSEI SASPVNEPMT HSQSYTSIDR LNSSSSHYSK 180
  181 DVPLLCGSLT IDCPTPIDLR GMLGPFMQKN PDEASFLRYS AITCQPEDMN NNGLQLRTWS 240
  241 TGRDIQIAVC LTLSDEDLAS FAISLSSIMN NLKHLCSRSK SRVWGNESWE KVLVCVVIDG 300
  301 RNTVHQNVLD LLASIGVYQP HIAKGRVNGK RTLSHMYEFT STINVDEKLN LTTATGDGNV 360
  361 PMQMLLCVKD RRLGTYNSHR WFLNGIASLA RPKVCLFVRN GARLGPTSIY HAWKAFDVDS 420
  421 TIGGMCGKTS IDTGKFGFRL LNPFIASQHF DQMIHNNLRL PYDSCMGYIS NALNAIYGFR 480
  481 YVALQDSYPN PGPLADYFEQ DQYEIPRRGI LQSNAFLAQE QLLFWKVITR KDAKWHLQYV 540
  541 PEACATIEAP NSMAGILESK KSEINSSFSL AVYVIVDFFS LWTTRHKFFR FLLLTVQSLV 600
  601 FAIEKLVNFF SMANFFLAFY FVCNATSYSS LNPYGNWARP LFLVFEYILI CLIFSQFMLA 660
  661 MGNRPRSCRV LLFISTALFS IIMIYFVFCV FYISLIPLHN SDNSEIVLGN NYFTTLIFSS 720
  721 LLILACYAFV SLICMDPFFI FTCIVQYILL MPTRIYTEQI YALCHLDDAS ISKDDNQQEF 780
  781 NFDTGITHCS MNDEGYTTIS IPKANVLNSV YNSSLKNFSS SNDTSVYHDV QDHCYRKPQS 840
  841 YEDHYQDIRT RYVLVWAVSN LILAIVLIQV FDGMRFINNG YMKYIFWSIV AFTAWKTMGA 900
  901 VTFIATKIIS RIANCVKSKL YIFNDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle