YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	pas1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVNMRALL ESFSTVILSI YPLAKSTNQQ SHSHSLSLTQ FLYETIRRSR VDYTTLLLAL  60
   61 YYFIRFRDAA SSKPTNYIPL LCGRRLFLVC LMAATKFLQD RSFSNRAWSR LSGLPVDKLL 120
  121 VLEYMFYQCI DYRLVVPKHI FARWSLLVGE CCAHATARYD STDPNVASFG SVAQYWVSLF 180
  181 SNVQSSLDDL FSIACLTKIA HRRMNANAAL KNQATRKPSS SPQTTQDSSP ILTMAPSTPV 240
  241 SVGSTPPSTP SVLPIAKQLA PMNVCKAHIQ ASNQSRTLTT ASPPEQIPLM EPQVYVNPQV 300
  301 LPGRLSSLSK PVSLPPTPSS PKVGVYRPMT SKSNGGVAYC YNAQKLNNAT GPVTFNMPFA 360
  361 SVLPLAVSVS CDLGTASAYV ASLPQPCSQK RHLEEDYSCL TEHSAKRRSY F

Type	Start	End	Confidence
Signal Peptide	1	24	0.41
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	411	0.97