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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cpy1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMKQTFLYF LLTCVVSAQF NGYVPPEQNG GDIVVPKDFY EKFGEDFIRE QEESSAPLMN  60
   61 PVPERDEAEA PHHPKGHHEF NDDFEDDTAL EHPGFKDKLD SFLQPARDFL HTVSDRLDNI 120
  121 FDDDEDEHVR EKRPHDSADE DAPRRKHGKC KGKGKHHKGK HAKGKGKKSH PKPEDDSVFF 180
  181 DDERPKHHEF DDEDREFPAH HEPGEHMPPP PMHHKPGEHM PPPPMHHEPG EHMPPPPMHH 240
  241 EPGEHMPPPP MHHEPGEHMP PPPMHHEPGE HMPPPPMHHE PGEHMPPPPM HHEPGEHMPP 300
  301 PPMHHEPGEH MPPPPMHHEP GEHMPPPPMH HEPGEHMPPP PFKHHELEEH EGPEHHRGPE 360
  361 DKEHHKGPKD KEHHKGPKDK EHHKGPKDKE HHKGPKDKEH HKGPKDKEHH KGPKDKEHHQ 420
  421 GPKEKHNERP EQNMQSSHEL LVIEAFADLI NSVPVEEIAE EFSRFLDTLG IEYYGNIPVH 480
  481 IQENAPKDSS IPPLFEFDDD LELSDLTPEQ FAYLEMLKAE GIDPMTAFRD QSHPAKPSNA 540
  541 QPADSSRPYA VFSQEENGEH VNLKAFPDHT LRVKDSKPES LGIDTVKQYT GYLDVEDDRH 600
  601 LFFWFFESRN DPENDPVVLW LNGGPGCSSL TGLFMELGPS SINIETLKPE YNPHSWNSNA 660
  661 SVIFLDQPIN TGFSNGDDSV LDTVTAGKDV YAFLNLFFAK FPQYAHLDFH IAGESYAGHY 720
  721 IPQFAKEIME HNQGANFFVA SGYEMEKQYI NLKSVLIGNG LTDPLVQYYF YGKMACESPY 780
  781 GPIMSQEECD RITGAYDTCA KLITGCYQTG FTPVCIGASL YCNNAMIGPF TKTGLNIYDI 840
  841 REECRDQEHL CYPETGAIES YLNQEFVQEA LGVEYDYKGC NTEVNIGFLF KGDWMRKTFR 900
  901 DDVTAILEAG LPVLIYAGDA DYICNYMGNE AWTDALEWAG QREFYEAELK PWSPNGKEAG 960
  961 RGKSFKNFGY LRLYEAGHMV PFNQPEASLE MLNSWIDGSL FA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle