YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPO_SCHPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHIFRRSIP ITARLPSLGI RSLATATASA HPPVQLYGLD GSYASSLYTA AVKESKLDNV  60
   61 EKALNKLSGV LQQRPEFEQY ISSPWLTRED KKILVSSLTQ MTGNEPLLKN FYNVLLDNHR 120
  121 LYLLTRIQKQ FSTLMRAKRG EIEVKITSAT PLDSKILSRL ESRIAKSKYG KGKLLVSNKV 180
  181 TPSIIGGLIV EIGDNILDVS VGSRLNNLNK LLSEPI

Type	Start	End	Confidence
Signal Peptide	1	30	0.92
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	216	0.99