YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	atp3
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRQTLTQAS RMRPCISVVG FRGFHASSPC EATLKEIEQR LKSIKNIEKI TKTIKTVAQT  60
   61 KLTRAQRAME ASNKYYRVSD EVFKEAGTKA PEEGKTLMVA CSSDKGLCGG IHSSISRLIR 120
  121 RELHDPKTFE NTSLCILGEK VRTQLLRFCP ESFYLTFAHI GGASPSFEEA LQISSNILEH 180
  181 AKDYDRIVLV YNKFASAVSF ETVMKNLYTT KAINESPNLS AYEVSDEVHQ PLMEFAFANA 240
  241 IFSAMAEAHC SEMSSRRNAM ENASKSAGDM INKFSIQYNR QRQASITNEL IDIVTGANSL 300
  301 A

Type	Start	End	Confidence
Signal Peptide	1	26	0.57
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	301	0.98