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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC29A4.19c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSIELKQLV PENDSEPGTP RQLLFQHYDI SNEETIGIKP FKSIPAKVYI LRVTEILTLG  60
   61 LLHLILTWLP EFRLKWIEAP CSNEDVEFVA ISDPSGTSSI EKVSSICLKN DIQTSSFVLP 120
  121 SGKTRYFEYK KLRFYLEPLN LQWVLMPLET SAYSLVTSTP AYIQNGLDTF TIAKLRQVYG 180
  181 SNSLVSTKKS IVTILLNEVL HPFYLFQAVS VLIWLCDSFV FYSCCIVFIS SYSIFLSVKE 240
  241 SKESENRIHS IIGAPQPVTV IRNQVKQTVL ADDLVIGDLL YFSNLDLKTC PVDGILFSSS 300
  301 CLLDESMVTG ESVPARKFPL EDNSLDSWMI ASCNIFSPHL IHAGTKFLKI DSTPSTPCLI 360
  361 SVVRTGFRSN KGQLIRNLLY PNLRPSQLYL DSMSFLKTMA ILSFVSIVFI AIYLNLYNAS 420
  421 FGHVVLRSLD VLTILVPPAL PATLSVGIAN SIARLSRALI YTTSPESIHN AGCLSTFVFD 480
  481 KTGTLTENSV QLSCVYVKSG SNGLLKQVDA DSLSLDSTKL NAHAYRVATC SQSLELVGNE 540
  541 LVGDPLEVTL FTQFNGTFCA TIRASNTPHP PLFSVSNSFD GPSQIFSIYK ALEFDPVLRR 600
  601 MSVICSTSTE RSLMLFTKGA PESILAISSQ QSIPSNVQEV IHTLSSKGFR IIAFASKNLI 660
  661 TPLQELIHLS RSTLESNVTF QGLFVLESPL RESSKDVISS LLRSKMEVSI CSGDSLFTSV 720
  721 FVAKHCGALD SCNFIYTAEL ADSGDDCPQI HFEKIDLQTQ NFQPIPDGFS LKDVILEKDS 780
  781 SLCMDGKLLQ RLLTMLSFNE IKILLSKLRV LARMSPFDKA TYVELCQKYG CKVGFCGDGA 840
  841 NDCIALKQAD VGVSLSDSEA CAAASFVSKK KSIKDVFNVL LEGRCSLILS HRCFQYMVLC 900
  901 AIVQFSGVFF LYLKNYNFND NQFLFMDLLI IFPLSAAMSY FDPAQNLTSN RPNSTLFGKG 960
  961 RVKDLGIQSV LIWLSHGLLT LILHELNWVE LPEWQLEKSN TKNVLVTSIF LLSSLQYLGI1020
 1021 CIGINQSSEF LSPIWKKKTY VCLCTTIGLC NIYLCFANEN HIISRCLQIT RLPTLYRFII1080
 1081 LFMGVISCCL TSILNM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle