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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cta3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTINISNPV YFSDIKDVES EFLTSIPNGL THEEAQNRLS EYGENRLEAD SGVSAWKVLL  60
   61 RQVLNAMCVV LILAAALSFG TTDWIEGGVI SAIIVLNITV GFIQEYKAEK TMDSLRTLAS 120
  121 PMAHVTRSSK TDAIDSHLLV PGDVVVLKTG DVVPADLRLV ETVNFETDEA LLTGESLPVI 180
  181 KDAHATFQMN EDVPIGDRIN LAYSSSIVTK GRAKGICYAT GMQTQIGAIA AGLRQKGKLF 240
  241 QRPEKDEPNY RRKLNKYYLK VTSYYVQRVL GLNVGTPLQR KLTVLAYILF CIAIILAIIV 300
  301 MAAHSFHVTN EVSIYAISLG ISIIPESLIA VLSITMAMGQ KNMSKRRVIV RKLEALEALG 360
  361 GVTDICSDKT GTITQGKMIT RRVWIPSYGY LSVDTSDANN PTIGTVSGLE AAMQDVLKEK 420
  421 KQEMKNIDPS NQPSDQFIPL LKTCALCNLS TVNQTETGEW VVKGEPTEIA LHVFSKRFNY 480
  481 GKEDLLKTNT FVREYPFDSE IKRMAVIYED QQGQYTVYAK GAVERILERC STSNGSTLEE 540
  541 PDRELIIAQM ETLAAEGLRV LALATKVIDK ADNWETLPRD VAESSLEFVS LVGIYDPPRT 600
  601 ESKGAVELCH RAGIRVHMLT GDHPETAKAI AREVGIIPPF ISDRDPNMSW MVMTGSQFDA 660
  661 LSDEEVDSLK ALCLVIARCA PQTKVKMIEA LHRRKAFVAM TGDGVNDSPS LKQANVGIAM 720
  721 GQNGSDVAKD ASDIVLTDDN FSSIVNAIEE GRRMFDNIMR FVLHLLVSNV GEVILLVVGL 780
  781 AFRDEVHLSV FPMSPVEILW CNMITSSFPS MGLGMELAQP DVMERLPHDN KVGIFQKSLI 840
  841 VDMMVYGFFL GVVSLMTWVV IMYGFGTGNL SYDCNAHYHA GCNDVFKARS AVFAVVTFCI 900
  901 LIMAVEVKNF DNSLFNLHGI PWGEWNFRYF LHTLVENKFL AWAIALAAVS VFPTIYIPVI 960
  961 NRDVFKHTYI GWEWGVVAVA VMFYFFYVEI WKSIRRSLTN PQKKGKFRRT LSNTITTESK1020
 1021 LSEKDLEHRL FLQSRRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle