YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	adh4
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILRSPFRL IRSPARFFPS LFHSSCNQSF TNGLKHQSTS SKAMPVSAFY IPSFNLFGKG  60
   61 CLAEAAKQIK MSGFKNTLIV TDPGIIKVGL YDKVKALLEE QSITVHLYDG VQPNPTVGNV 120
  121 NQGLEIVKKE NCDSMVSIGG GSAHDCAKGI ALLATNGGKI ADYEGVDKSS KPQLPLIAIN 180
  181 TTAGTASEMT RFAIITEETR HIKMAIIDKH TMPILSVNDP ETMYGLPPSL TAATGMDALT 240
  241 HAVEAYVSTA ANPITDACAV KCIELVNKYL KRAVDNGKDE EARDNMAYAE FLGGMAFNNA 300
  301 SLGYVHAMAH QLGGFYGIPH GVCNAVLLAH VQKFNSRDPR ANARLGDIAF HLGCEEHTAE 360
  361 AALDRISQLV LEVKIRPHLV DLGVKEKDFD VLVDHAMKDA CGATNPIQPT HDEVKAIFKS 420
  421 AM

Type	Start	End	Confidence
Signal Peptide	1	28	0.49
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	422	0.96