YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG1724-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYSREPCP FRIVDDCGGA FTMGCFGGGL FQGLKGFRNA PQGLKRRFAG GLAAVKSRSP  60
   61 TIGGNFAAWG CVFSIVDCSL VHLRKKEDPW NSIMSGAIAG GILSSRNGVA AMFGSAIIGG 120
  121 VLLSMIEGVG ILFTRISAEQ FRNSDPQNDL GRAGAFASGS GMGSGDINSS PGFEFPVVQQ 180
  181 ANATS

Type	Start	End	Confidence
Cytoplasmic	1	12	0.72
Transmembrane Helix	13	34	0.60
Non-Cytoplasmic	35	60	0.54
Transmembrane Helix	61	81	0.68
Cytoplasmic	82	89	0.55
Transmembrane Helix	90	105	0.46
Non-Cytoplasmic	106	108	0.43
Transmembrane Helix	109	134	0.82
Cytoplasmic	135	185	0.68