YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG34120-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVHLNGREV RELLRKDLLV RWRQKGLSLI LLAWPVMVFM LLYLIRLKYG SEELEACQYP  60
   61 TRLLPTKNQV VPAAFSYICS IENRCQPAHP YEEYSHWKEA PLHSVIDVVN AFVTDERLHK 120
  121 AVVELAEKAN FVSAITTLIT SDRFDIIRSN ISEIISLVPE IERRMNYSFD IKHLFSNRET 180
  181 FVKLGVLLCG HPFPNTDTIP LVNEILESED FSQANDAEID AMPTRRRRRY EDLPTDWRPS 240
  241 EHDQIFFNI

Type	Start	End	Confidence
Cytoplasmic	1	24	0.88
Transmembrane Helix	25	45	0.91
Non-Cytoplasmic	46	249	0.96