YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Mgstl-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPVELLSL SNPVFKSFTF WVGVLVIKML LMSLLTAIQR FKTKTFANPE DLMSPKLKVK  60
   61 FDDPNVERVR RAHRNDLENI LPFFAIGLLY VLTDPAAFLA INLFRAVGIA RIVHTLVYAV 120
  121 VVVPQPSRAL AFFVALGATV YMALQVIASA AF

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.84
Transmembrane Helix	17	38	0.90
Cytoplasmic	39	79	0.85
Transmembrane Helix	80	101	0.82
Non-Cytoplasmic	102	102	0.56
Transmembrane Helix	103	122	0.51
Cytoplasmic	123	128	0.47
Transmembrane Helix	129	151	0.86
Non-Cytoplasmic	152	152	0.56