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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22832669, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHHHPLPIA TATASAFAFA FATQLHPSRT WHGDNAVGVP DGEHFVVATE QQCHTVHSCP  60
   61 AYKSTYASSS PSAPSIMKQA QWAAAISLAV GNGSDYKERL IASVKKEVKQ LMEEAVTKKY 120
  121 VHEESSSVTS LCGAVEACLS QGLRRRALGL FKTSSTTALL HKIAKSCPEA EHISKLVQEI 180
  181 EASDPSKRSS SSSDSFQRPP MLKKSSSNSM STGTNAAAST SSASASISVS ASTSSMSLAS 240
  241 MKYLWIRLAL YEKRLTKIIE YLVSNASSFY DRDSLVADSD YGSILSSLLV GPCALEFTRA 300
  301 KTADHYWTDP HADELVQRHR ISSCRRSSST CSRPAIINFK RSLNTSSDEA GTGSFKSIAS 360
  361 ASVAKDYVES LHQNAKATLL YGKNNVQVLP KDVAEPMPGY LSLHQHIQTL TIKWTPNQLM 420
  421 NGYTEAEEAE DIDKDAFWAY ALNINVDEIV YVHCHQSRGE DSGGTVILVG QDGVQRPPIH 480
  481 FPEGGHMQQF LSCLETGLLP HGQLDPPLWS QRGIGKMFLW PRSMRRRILP SVMESVDETP 540
  541 IDYVFRIVSK SRHEEFAATH SILDFVRSTP RRAQLSSCST TGSSDCSNKS LSIDQFPMES 600
  601 PLILQQQQQQ QQQLLQAQST SIEMVCSTMR RQIISRAFYG WLAYCRHLST VRTHLSGLVH 660
  661 GRITPEMKAD EEGLTKERWQ LLNVNGVLEN ATEFYRLVYF GGVQPELRQE VWPYLLGHYA 720
  721 FGSTTEDRKK QDETCKHYYE TTMSEWLAVD AIVQQREKEK TARAVAKLSS GSNSGNDRTV 780
  781 RAADLEAGGD LENEVFEDIS DISDPGDLEF DEQQQQQQQQ AECAVSGNHL TVKPIPRAMK 840
  841 TSTDSGHVDE SFNELDEPDE EDNKQKQQQD EKISESESKL PDYRKLEEQI NQEPSCSAST 900
  901 ASSYETVGPG EVHQRPNSDT RSVLSPEYLS ADDLQLPDDE DAVRPPPPPA AAAVIITKAS 960
  961 VDITNWERSP KAAEGDQMSP LEEQAGESGG AGVNMDALQQ PKSACASPAS SNGGVYSSEL1020
 1021 LEQFGLNLHR IEKDVQRCDR NYWYFANENL DKLRNVISTY VWEHLDVGYM QGMCDLVAPL1080
 1081 LVIFDDESLS YSCFCKLMER MIENFPSGGA MDMHFANMRS LIQILDSEMY DLMDSNGDYT1140
 1141 HFYFCYRWFL LDFKRELVYD DVFATWEVIW AAKHIASGHF VLFLALALLE TYRDIILSNS1200
 1201 MDFTDVIKFF NEMAERHNAQ SVLQLARSLV LQLQMIIENK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle