YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	amn-PA
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.25
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSFCCCFYP AAVALHCVLL FYTFFLLFRA SALRRRVVSG SKGSAALALC RQFEQLSASR  60
   61 RERAEECRTT QLRYHYHRNG AQSRSLCAAV LCCKRSYIPR PNFSCFSLVF PVGQRFAAAR 120
  121 TRFGPTLVAS WPLCNDSETK VLTKWPSCSL IGRRSVPRGQ PKFSRENPRA LSPSLLGEMR 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	6	0.25
Transmembrane Helix	7	28	0.55
Non-Cytoplasmic	29	180	0.65